Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567379: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318724' containing sample 'VET0244R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 12.1M spots, 2.4G bases, 1.1Gb downloads

UUID: 37219217-9427-45b3-aef1-e1e7b332b7e1

Design: Illumina sequencing of Staphylococcus aureus VET0244R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228620 • SRP042824 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0244R

SAMN02404112 • SRS626892 • All experiments • All runs

Organism: Staphylococcus aureus VET0244R

Library:

Name: Pond-318724

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471485.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLES

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55343

research_project: RP-513

root_sample_id: SM-4Q5OM

sample_id: SM-5CLES

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 12.1M spots, 2.4G bases, 1.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR1329258	3,024,794	611M	294.1Mb	2014-06-03
SRR1329284	3,053,544	616.8M	295.7Mb	2014-06-03
SRR1329304	3,018,796	609.8M	295.5Mb	2014-06-03
SRR1342194	2,998,880	605.8M	290.9Mb	2014-06-05

ID:: 810196

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