Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX473212: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319624' containing sample 'DAR5832'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.3M spots, 1.1G bases, 482.1Mb downloads

UUID: 9e64f95b-efc4-4386-8e79-3688083749d8

Design: Illumina sequencing of Staphylococcus aureus DAR5832 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228432 • SRP038283 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR5832

SAMN02403892 • SRS559565 • All experiments • All runs

Organism: Staphylococcus aureus DAR5832

Library:

Name: Pond-319624

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471159.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CGML

material_type: DNA:DNA Somatic

product_order: PDO-2701

product_part_number: P-WG-0004

project: G54687

research_project: RP-506

root_sample_id: SM-4DPLS

sample_id: SM-5CGML

work_request: 39314

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.3M spots, 1.1G bases, 482.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172626	2,634,773	532.2M	241.9Mb	2014-02-20
SRR1172701	2,622,113	529.7M	240.2Mb	2014-02-20

ID:: 653702

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