Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX555873: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315247' containing sample 'M357'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 574M bases, 263Mb downloads

UUID: 52b0518f-ade7-48aa-b79d-c978f28644a4

Design: Illumina sequencing of Staphylococcus aureus M357 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226396 • SRP042565 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M357

SAMN02391270 • SRS622955 • All experiments • All runs

Organism: Staphylococcus aureus M357

Library:

Name: Pond-315247

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445758.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571WC

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51791

research_project: RP-513

root_sample_id: SM-4Q7ES

sample_id: SM-571WC

work_request: 39112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.8M spots, 574M bases, 263Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303569	2,841,469	574M	263Mb	2014-05-30

ID:: 794901

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity