Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392282: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-287624' containing sample 'Staphylococcus aureus MISS6092'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3M spots, 614.4M bases, 306.7Mb downloads

UUID: c74eb338-0891-4cb8-b38e-209c6d7387f4

Design: Illumina sequencing of Staphylococcus aureus MISS6092 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA223986 • SRP034331 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus MISS6092

SAMN02381725 • SRS515432 • All experiments • All runs

Organism: Staphylococcus aureus MISS6092

Library:

Name: Pond-287624

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 419466.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YVYY

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49941

research_project: RP-493

root_sample_id: SM-4T2LP

sample_id: SM-4YVYY

work_request: 38774

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-18 11:59:18.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3M spots, 614.4M bases, 306.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050259	1,545,029	312.1M	152.6Mb	2013-12-15
SRR1050260	1,496,325	302.3M	154.1Mb	2013-12-15

ID:: 563129

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