Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX373451: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282966' containing sample 'Staphylococcus aureus M1489'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 694.3M bases, 312Mb downloads

UUID: d17d2968-8f7c-48ea-9644-334273fa07ee

Design: Illumina sequencing of Staphylococcus aureus M1489 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221419 • SRP032590 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1489

SAMN02364012 • SRS498813 • All experiments • All runs

Organism: Staphylococcus aureus M1489

Library:

Name: Pond-282966

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409494.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOTP

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48707

research_project: RP-433

root_sample_id: SM-4D1MV

sample_id: SM-4WOTP

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 694.3M bases, 312Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025068	1,724,636	348.4M	156.4Mb	2013-11-05
SRR1025069	1,712,348	345.9M	155.5Mb	2013-11-05

ID:: 533664

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