Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364562: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278638' containing sample 'Staphylococcus aureus M1031'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4M spots, 810.7M bases, 385.6Mb downloads

UUID: 3e45b2fe-66f8-45f6-9ede-03221e1ee2c7

Design: Illumina sequencing of Staphylococcus aureus M1031 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217130 • SRP031407 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1031

SAMN02334654 • SRS490979 • All experiments • All runs

Organism: Staphylococcus aureus M1031

Library:

Name: Pond-278638

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396210.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWMK

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46193

research_project: RP-433

root_sample_id: SM-4C5FL

sample_id: SM-4UWMK

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4M spots, 810.7M bases, 385.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012177	2,008,567	405.7M	192.8Mb	2013-10-16
SRR1012178	2,004,936	405M	192.8Mb	2013-10-16

ID:: 521380

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