Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX363648: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277955' containing sample 'Staphylococcus aureus M0935'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 871.1M bases, 396.5Mb downloads

UUID: 1bd45ce9-3791-426c-bfe4-002c10d5a29e

Design: Illumina sequencing of Staphylococcus aureus M0935 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216874 • SRP030923 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0935

SAMN02325825 • SRS490278 • All experiments • All runs

Organism: Staphylococcus aureus M0935

Library:

Name: Pond-277955

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394102.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T88B

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46124

research_project: RP-433

root_sample_id: SM-4C9MV

sample_id: SM-4T88B

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 871.1M bases, 396.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010769	2,185,687	441.5M	200.7Mb	2013-10-09
SRR1010770	2,126,827	429.6M	195.8Mb	2013-10-09

ID:: 516085

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