Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX367917: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279397' containing sample 'Staphylococcus aureus M0779'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4M spots, 813.8M bases, 342.3Mb downloads

UUID: bda1c220-60a9-4bb2-90c2-b4abcdb483da

Design: Illumina sequencing of Staphylococcus aureus M0779 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216746 • SRP031926 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0779

SAMN02325697 • SRS493966 • All experiments • All runs

Organism: Staphylococcus aureus M0779

Library:

Name: Pond-279397

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396280.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWOK

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45288

research_project: RP-433

root_sample_id: SM-4CXEE

sample_id: SM-4UWOK

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4M spots, 813.8M bases, 342.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1016959	2,013,608	406.7M	171.5Mb	2013-10-25
SRR1016960	2,015,169	407.1M	170.8Mb	2013-10-25

ID:: 526548

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