Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX367905: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279383' containing sample 'Staphylococcus aureus M0744'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 932M bases, 399.5Mb downloads

UUID: 853c197f-ec77-4895-bf1c-c230ad7cc10c

Design: Illumina sequencing of Staphylococcus aureus M0744 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216736 • SRP031913 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0744

SAMN02325687 • SRS493953 • All experiments • All runs

Organism: Staphylococcus aureus M0744

Library:

Name: Pond-279383

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396266.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWO6

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45278

research_project: RP-433

root_sample_id: SM-4CXE2

sample_id: SM-4UWO6

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 932M bases, 399.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1016929	2,306,494	465.9M	200.2Mb	2013-10-25
SRR1016930	2,307,294	466.1M	199.3Mb	2013-10-25

ID:: 526536

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