Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359314: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271620' containing sample 'Staphylococcus aureus M0220'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 922.3M bases, 395.9Mb downloads

UUID: 475dec44-a864-4436-8961-73962c704893

Design: Illumina sequencing of Staphylococcus aureus M0220 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216314 • SRP030381 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0220

SAMN02325269 • SRS486970 • All experiments • All runs

Organism: Staphylococcus aureus M0220

Library:

Name: Pond-271620

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385021.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHJT

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44604

research_project: RP-433

root_sample_id: SM-4C5DY

sample_id: SM-4RHJT

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 922.3M bases, 395.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001807	2,291,591	462.9M	198.5Mb	2013-09-24
SRR1001808	2,274,147	459.4M	197.4Mb	2013-09-24

ID:: 507615

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