Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX359287: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271607' containing sample 'Staphylococcus aureus M0194'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.7M spots, 751.2M bases, 337.8Mb downloads

UUID: 7a766a33-43d4-485d-b1bd-29e87d77265c

Design: Illumina sequencing of Staphylococcus aureus M0194 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216297 • SRP030364 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0194

SAMN02325252 • SRS486948 • All experiments • All runs

Organism: Staphylococcus aureus M0194

Library:

Name: Pond-271607

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385008.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHJG

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44587

research_project: RP-433

root_sample_id: SM-4C5DG

sample_id: SM-4RHJG

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.7M spots, 751.2M bases, 337.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001775	1,867,687	377.3M	169.5Mb	2013-09-24
SRR1001776	1,851,223	373.9M	168.3Mb	2013-09-24

ID:: 507588

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity