Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX548070: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318384' containing sample 'VET0402R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1G bases, 488.2Mb downloads

UUID: bcf0599b-306e-46de-9793-a34d9ad961f5

Design: Illumina sequencing of Staphylococcus aureus VET0402R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0402R

SAMN02404216 • SRS616327 • All experiments • All runs

Organism: Staphylococcus aureus VET0402R

Library:

Name: Pond-318384

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470113.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8TT

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55156

research_project: RP-513

root_sample_id: SM-4PMVH

sample_id: SM-5C8TT

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1G bases, 488.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293418	2,601,408	525.5M	244.6Mb	2014-05-21
SRR1293616	2,586,126	522.4M	243.6Mb	2014-05-21

ID:: 785028

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