Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566082: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318765' containing sample 'VET0306R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 16.2M spots, 3.3G bases, 1.6Gb downloads

UUID: 1acdfccf-0568-42f5-a326-c243db52ff07

Design: Illumina sequencing of Staphylococcus aureus VET0306R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228664 • SRP042699 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0306R

SAMN02404156 • SRS626339 • All experiments • All runs

Organism: Staphylococcus aureus VET0306R

Library:

Name: Pond-318765

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471526.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLFY

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55386

research_project: RP-513

root_sample_id: SM-4Q5PW

sample_id: SM-5CLFY

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 16.2M spots, 3.3G bases, 1.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR1326968	4,021,335	812.3M	399.8Mb	2014-06-03
SRR1340405	4,091,215	826.4M	405.9Mb	2014-06-05
SRR1342200	4,049,113	817.9M	406Mb	2014-06-05
SRR1346352	4,053,985	818.9M	403.9Mb	2014-06-06

ID:: 808899

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