Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555805: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319978' containing sample 'VET1368S' from individual 'VET0241'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.4M spots, 494M bases, 245.7Mb downloads

UUID: a43e5ad8-437f-4ac5-b90b-2f26b89a80c8

Design: Illumina sequencing of Staphylococcus aureus VET1368S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228877 • SRP042530 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1368S

SAMN02404367 • SRS622888 • All experiments • All runs

Organism: Staphylococcus aureus VET1368S

Library:

Name: Pond-319978

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473567.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVKR

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G55002

research_project: RP-513

root_sample_id: SM-4Q553

sample_id: SM-5CVKR

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.4M spots, 494M bases, 245.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303500	2,445,533	494M	245.7Mb	2014-05-30

ID:: 794833

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