Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368002: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281009' containing sample 'Staphylococcus aureus M1230'
1 ILLUMINA (Illumina HiSeq 2000) run: 1.7M spots, 350.9M bases, 158.7Mb downloads

UUID: eacd90c5-393e-43bf-84c7-e1533dc793f0

Design: Illumina sequencing of Staphylococcus aureus M1230 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220077 • SRP031997 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1230

SAMN02360884 • SRS494048 • All experiments • All runs

Organism: Staphylococcus aureus M1230

Library:

Name: Pond-281009

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407573.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WAZN

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48394

research_project: RP-433

root_sample_id: SM-4CQND

sample_id: SM-4WAZN

work_request: 38310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 1.7M spots, 350.9M bases, 158.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017207	1,737,289	350.9M	158.7Mb	2013-10-25

ID:: 526633

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