Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422841: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293549' containing sample 'Staphylococcus aureus F84093'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 972M bases, 477.2Mb downloads

UUID: ea60113e-8414-4f14-9d2b-cf754788898d

Design: Illumina sequencing of Staphylococcus aureus F84093 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224336 • SRP035035 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F84093

SAMN02383626 • SRS526891 • All experiments • All runs

Organism: Staphylococcus aureus F84093

Library:

Name: Pond-293549

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433231.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J9I

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50712

research_project: RP-509

root_sample_id: SM-4T4SO

sample_id: SM-53J9I

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 972M bases, 477.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103444	2,377,175	480.2M	235.6Mb	2014-01-07
SRR1103515	2,434,772	491.8M	241.6Mb	2014-01-07

ID:: 598315

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