Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX373484: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282972' containing sample 'Staphylococcus aureus M1530'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 707.1M bases, 317.2Mb downloads

UUID: 8602f631-1375-48c1-b828-248de93fe673

Design: Illumina sequencing of Staphylococcus aureus M1530 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221454 • SRP032623 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1530

SAMN02364047 • SRS498846 • All experiments • All runs

Organism: Staphylococcus aureus M1530

Library:

Name: Pond-282972

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409500.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOTV

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48739

research_project: RP-433

root_sample_id: SM-4D1NV

sample_id: SM-4WOTV

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 707.1M bases, 317.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025134	1,743,545	352.2M	158.1Mb	2013-11-05
SRR1025135	1,756,949	354.9M	159.1Mb	2013-11-05

ID:: 533697

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