Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368175: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279930' containing sample 'Staphylococcus aureus M1470'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 876.5M bases, 396Mb downloads

UUID: 660b8f6e-8a1f-4a12-98df-080f0b614dfc

Design: Illumina sequencing of Staphylococcus aureus M1470 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218453 • SRP032157 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1470

SAMN02350632 • SRS494216 • All experiments • All runs

Organism: Staphylococcus aureus M1470

Library:

Name: Pond-279930

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402382.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJNV

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47916

research_project: RP-433

root_sample_id: SM-4CWAH

sample_id: SM-4VJNV

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 876.5M bases, 396Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017465	2,170,606	438.5M	198.4Mb	2013-10-25
SRR1017466	2,168,352	438M	197.6Mb	2013-10-25

ID:: 526806

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