Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX363634: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277976' containing sample 'Staphylococcus aureus M0916'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 699.3M bases, 346.2Mb downloads

UUID: d1acabc1-cae9-4a56-9aa7-7c54f9be6536

Design: Illumina sequencing of Staphylococcus aureus M0916 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216860 • SRP030909 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0916

SAMN02325811 • SRS490264 • All experiments • All runs

Organism: Staphylococcus aureus M0916

Library:

Name: Pond-277976

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394122.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T88W

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46110

research_project: RP-433

root_sample_id: SM-4C9MH

sample_id: SM-4T88W

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 699.3M bases, 346.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010741	1,710,580	345.5M	171.3Mb	2013-10-09
SRR1010742	1,751,241	353.8M	174.9Mb	2013-10-09

ID:: 516071

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