Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX367986: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279340' containing sample 'Staphylococcus aureus M0858'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 976.5M bases, 425.2Mb downloads

UUID: 1acd8088-f0d3-411e-a711-b5a06798279e

Design: Illumina sequencing of Staphylococcus aureus M0858 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216802 • SRP031986 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0858

SAMN02325753 • SRS494032 • All experiments • All runs

Organism: Staphylococcus aureus M0858

Library:

Name: Pond-279340

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396223.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWMX

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45344

research_project: RP-433

root_sample_id: SM-4CXG5

sample_id: SM-4UWMX

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 976.5M bases, 425.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017193	2,415,527	487.9M	213Mb	2013-10-25
SRR1017194	2,418,798	488.6M	212.2Mb	2013-10-25

ID:: 526617

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