Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from Nucleotide

SRX364403: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275841' containing sample 'Staphylococcus aureus M0490'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 616.9M bases, 264.2Mb downloads

UUID: b87f3811-15c5-4e33-9588-890b79e5e358

Design: Illumina sequencing of Staphylococcus aureus M0490 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216496 • SRP031250 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0490

SAMN02325450 • SRS490821 • All experiments • All runs

Organism: Staphylococcus aureus M0490

Library:

Name: Pond-275841

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386024.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJT2

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G45043

research_project: RP-433

root_sample_id: SM-4CYKD

sample_id: SM-4RJT2

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 616.9M bases, 264.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011947	1,533,649	309.8M	132.2Mb	2013-10-16
SRR1011948	1,520,533	307.1M	132Mb	2013-10-16

ID:: 521221

SRA

Sequence Read Archive

Result Filters

Send to:

Links from Nucleotide

Supplemental Content

Related information

Recent activity