Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364291: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275275' containing sample 'Staphylococcus aureus M0341'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 846.7M bases, 391.8Mb downloads

UUID: fcdc0004-d265-4ed3-8fe7-e9a11e171564

Design: Illumina sequencing of Staphylococcus aureus M0341 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216396 • SRP031138 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0341

SAMN02325350 • SRS490709 • All experiments • All runs

Organism: Staphylococcus aureus M0341

Library:

Name: Pond-275275

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385957.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJR5

material_type: DNA:DNA Somatic

product_order: PDO-1798

product_part_number: P-WG-0004

project: G44771

research_project: RP-433

root_sample_id: SM-4CUMF

sample_id: SM-4RJR5

work_request: 37547

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-04 02:35:40.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 2 runs, 4.2M spots, 846.7M bases, 391.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011725	2,132,896	430.8M	200.4Mb	2013-10-16
SRR1011726	2,058,494	415.8M	191.5Mb	2013-10-16

ID:: 521109

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