Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359294: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271597' containing sample 'Staphylococcus aureus M0204'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 889.2M bases, 383.4Mb downloads

UUID: 2f8ddce9-f435-41ba-80a0-f76f8659f736

Design: Illumina sequencing of Staphylococcus aureus M0204 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216304 • SRP030371 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0204

SAMN02325259 • SRS486955 • All experiments • All runs

Organism: Staphylococcus aureus M0204

Library:

Name: Pond-271597

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 384998.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHJ6

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44594

research_project: RP-433

root_sample_id: SM-4C5DO

sample_id: SM-4RHJ6

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.4M spots, 889.2M bases, 383.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001789	2,193,968	443.2M	191.3Mb	2013-09-24
SRR1001790	2,208,100	446M	192.1Mb	2013-09-24

ID:: 507595

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