Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364402: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275830' containing sample 'Staphylococcus aureus M0488'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 634.3M bases, 271.3Mb downloads

UUID: cb9cdb0d-0dd8-44f0-bd97-de6701ca0014

Design: Illumina sequencing of Staphylococcus aureus M0488 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216495 • SRP031249 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0488

SAMN02325449 • SRS490820 • All experiments • All runs

Organism: Staphylococcus aureus M0488

Library:

Name: Pond-275830

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386013.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJSQ

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G45042

research_project: RP-433

root_sample_id: SM-4CYKC

sample_id: SM-4RJSQ

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 634.3M bases, 271.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011945	1,565,464	316.2M	135.7Mb	2013-10-16
SRR1011946	1,574,785	318.1M	135.6Mb	2013-10-16

ID:: 521220

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