Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX363574: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277804' containing sample 'Staphylococcus aureus M0720'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 642.1M bases, 303Mb downloads

UUID: 67a08d2b-ba84-4c1e-bd3e-3e12841c9705

Design: Illumina sequencing of Staphylococcus aureus M0720 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216655 • SRP030849 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0720

SAMN02325607 • SRS490204 • All experiments • All runs

Organism: Staphylococcus aureus M0720

Library:

Name: Pond-277804

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394419.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T8EU

material_type: DNA:DNA Somatic

product_order: PDO-1801

product_part_number: P-WG-0004

project: G44684

research_project: RP-433

root_sample_id: SM-4C88W

sample_id: SM-4T8EU

work_request: 37550

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 00:01:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 642.1M bases, 303Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010616	1,575,672	318.3M	149.7Mb	2013-10-09
SRR1010617	1,602,882	323.8M	153.3Mb	2013-10-09

ID:: 516011

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