Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from Nucleotide

SRX363530: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277755' containing sample 'Staphylococcus aureus M0658'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.9M spots, 781.1M bases, 391.3Mb downloads

UUID: 314b7f77-cb2e-4a9d-b1ba-fbebaef0ad3d

Design: Illumina sequencing of Staphylococcus aureus M0658 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216610 • SRP030805 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0658

SAMN02325563 • SRS490160 • All experiments • All runs

Organism: Staphylococcus aureus M0658

Library:

Name: Pond-277755

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394370.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T8DG

material_type: DNA:DNA Somatic

product_order: PDO-1801

product_part_number: P-WG-0004

project: G44640

research_project: RP-433

root_sample_id: SM-4C87I

sample_id: SM-4T8DG

work_request: 37550

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 00:01:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.9M spots, 781.1M bases, 391.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010527	1,917,001	387.2M	193.5Mb	2013-10-09
SRR1010528	1,949,772	393.9M	197.8Mb	2013-10-09

ID:: 515967

SRA

Sequence Read Archive

Result Filters

Send to:

Links from Nucleotide

Supplemental Content

Related information

Recent activity