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SRX3918680: WGS of Salmonella enterica
1 ILLUMINA (Illumina MiSeq) run: 813,952 spots, 314.3M bases, 175Mb downloads

Design: Nextera XT Library Prep Kit
Submitted by: Texas A&M University
Study: Salmonella enterica subsp. enterica Genome sequencing and assembly
show Abstracthide Abstract
Salmonella enterica (non-Typhi) is one of the most common food-borne pathogens, primarily originating in agricultural animals, which can enter the food chain and cause salmonellosis in humans. Importantly a small number of serovars of Salmonella are responsible for the majority of cases of human salmonellosis. Salmonella enterica serovars typically exhibit a limited range of animal hosts, often referred to as serovar-host specificity. Swine, cattle, and poultry each carry different strains of Salmonella and only certain strains cause infectious disease in these hosts, with the remaining strains carried in a subclinical status or in a commensal relationship. In recent years, the Centers for Disease Control and Prevention has reported a rise in human foodborne illnesses related to antibiotic resistant Salmonella enterica serovar I 4,[5], 12:i:- largely associated with the consumption of contaminated pork. Salmonella I 4,[5], 12:i:- is a serovar antigenically similar to Salmonella enterica serovar Typhimurium; however, it lacks the phase two flagellar antigen making it a monophasic variant.
Library:
Name: E53H1
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 813,952 spots, 314.3M bases, 175Mb
Run# of Spots# of BasesSizePublished
SRR6977153813,952314.3M175Mb2018-04-10

ID:
5375926

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