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ERX2421463: PacBio RS sequencing
1 PACBIO_SMRT (PacBio RS) run: 163,482 spots, 3.5G bases, 11.4Gb downloads

Submitted by: OXFORD UNIVERSITY
Study: We report eight new high-quality genomes of Orientia tsutsugamushi, generated using PacBio single molecule long read sequencing.
show Abstracthide Abstract
Orientia tsutsugamushi is a severe but neglected obligate intracellular bacterial pathogen of the Rickettsiaceae family that causes the life-threatening human disease scrub typhus. Orientia possesses the most highly repetitive bacterial genome sequenced to date. This has hampered efforts to generate complete genome sequences using short read sequencing methodologies, and consequently there have been few studies investigating the comparative genomics of this neglected species. We report eight new high-quality genomes of Orientia tsutsugamushi, generated using PacBio single molecule long read sequencing. These strains include FPW1038, Karp, Kato, Gilliam, TA686, TA763, UT76 and UT176.
Sample: Orientia tsutsugamushi genomes
SAMEA104570321 • ERS2181605 • All experiments • All runs
Library:
Name: Kato
Instrument: PacBio RS
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 163,482 spots, 3.5G bases, 11.4Gb
Run# of Spots# of BasesSizePublished
ERR2373153163,4823.5G11.4Gb2018-03-31

ID:
5318012

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