U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX4477296: FWSconsortium, WGS of E. coli: Domesticated, Livestock; Bovine; animal manure; agricultural - farm
1 ILLUMINA (Illumina MiSeq) run: 849,199 spots, 419M bases, 275.1Mb downloads

Design: MasterPure Complete DNA purification kit; Covaris E210 physical fragmentation; TruSeq DNA library kit 2x250bp paired end on Illumina Miseq
Submitted by: NML_bioinformatics (NML_bioinfo)
Study: Food and Water Safety consortium
show Abstracthide Abstract
The food and water safety pilot project is a comprehensive strategy that integrates multidisciplinary components from diverse federal science sources to address two main goals. The first is to enhance food and water safety by developing genomics-based methods for pathogen isolation, detection and characterisation. The second goal is to develop a federally integrated system to manage, store and provide open access to genomic data related to food and water borne pathogens. The model organisms for this study are Shiga-toxin Producing Escherchia coli (STEC) and Salmonella Enteritidis from Environmental, animal husbandry, food samples, and medical isolates.
Sample:
SAMN08797380 • SRS3602564 • All experiments • All runs
Library:
Name: FWSEC0514
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 849,199 spots, 419M bases, 275.1Mb
Run# of Spots# of BasesSizePublished
SRR7612433849,199419M275.1Mb2019-01-22

ID:
6063187

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...