U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX4781386: FWSconsortium, WGS of E. coli: Proficiency Panel Isolate; Human (Homo sapiens);
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 1.6M spots, 362.9M bases, 232.6Mb downloads

Design: MasterPure Complete DNA purification kit; Covaris E210 physical fragmentation; TruSeq DNA library kit 2x150bp paired end on Illumina GA IIx
Submitted by: Public Health Agency of Canada
Study: Food and Water Safety consortium
show Abstracthide Abstract
The food and water safety pilot project is a comprehensive strategy that integrates multidisciplinary components from diverse federal science sources to address two main goals. The first is to enhance food and water safety by developing genomics-based methods for pathogen isolation, detection and characterisation. The second goal is to develop a federally integrated system to manage, store and provide open access to genomic data related to food and water borne pathogens. The model organisms for this study are Shiga-toxin Producing Escherchia coli (STEC) and Salmonella Enteritidis from Environmental, animal husbandry, food samples, and medical isolates.
Sample: stx1c stx2b
SAMN08797023 • SRS3602413 • All experiments • All runs
Library:
Name: FWSEC0077
Instrument: Illumina Genome Analyzer IIx
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.6M spots, 362.9M bases, 232.6Mb
Run# of Spots# of BasesSizePublished
SRR79472221,583,037362.9M232.6Mb2019-01-22

ID:
6466693

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...