Whole-genome shotgun DNA sequencing of Klebsiella pneumoniae: human b... - SRA

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SRX3752880: Whole-genome shotgun DNA sequencing of Klebsiella pneumoniae: human bloodstream isolate
1 ILLUMINA (Illumina HiSeq 4000) run: 6.1M spots, 1.2G bases, 443.1Mb downloads

Design: DNA was extracted from cultured bacterial isolate, dual-index libraries prepared using the Illumina Nextera XT kit, and 101bp paired-end reads were generated on the Illumina HiSeq 4000 platform.

Submitted by: Stanford Healthcare

Study: Carbapenem-Resistant Enterobacteriaceae at a Health Care System in Silicon Valley, California

PRJNA436373 • SRP133707 • All experiments • All runs

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Carbapenem-resistant Enterobacteriaceae (CRE) are emerging as a major health threat in North America. The mechanism of resistance to carbapenems has therapeutic and public health implications. The aim of this study was to comprehensively characterize the underlying mechanisms of carbapenem resistance in CRE isolates at a health system in Silicon Valley, California.

Sample:

SAMN08623833 • SRS3009031 • All experiments • All runs

Organism: Klebsiella pneumoniae

Library:

Name: CRE83

Instrument: Illumina HiSeq 4000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 6.1M spots, 1.2G bases, 443.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR6793801	6,069,814	1.2G	443.1Mb	2018-03-29

ID:: 5175399

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