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SRX3571955: Mapped reads for uncultivated Petrotoga sp. UBA12548 genome recovered from SRX997725
1 ILLUMINA (Illumina HiSeq 2500) run: 1.7M spots, 263.8M bases, 57.6Mb downloads

Design: Reads from SRX997725 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12548 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Petrotoga sp. UBA12548 genome recovered from SRX997725
SAMN08019219 • SRS2842943 • All experiments • All runs
Organism: Petrotoga sp.
Library:
Name: UBA12548_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.7M spots, 263.8M bases, 57.6Mb
Run# of Spots# of BasesSizePublished
SRR64821321,655,656263.8M57.6Mb2018-01-29

ID:
4957457

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