WGS of S. Typhimurium 74 (D15-052810): Biofilm former - SRA

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SRX3141857: WGS of S. Typhimurium 74 (D15-052810): Biofilm former
1 ILLUMINA (Illumina MiSeq) run: 556,701 spots, 260.3M bases, 138.1Mb downloads

Design: Genomic DNA isolation was performed using the DNeasy blood and tissue kit (Qiagen, USA). The genomic libraries were prepared using the Nextera XT library prep kit, and 250-bp paired-end sequencing was performed using the Illumina MiSeq platform (Illumina, USA).

Submitted by: University of Saskatchewan

Study: Whole Genome Analysis of Non-typhoidal Salmonella Strains with Distinct Biofilm-forming Characteristics

PRJNA395602 • SRP116357 • All experiments • All runs

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The goal of this study was to obtain genomic data for six strains of Salmonella enteric Non-typhoidal serovars (NTS) with distinct biofilm-forming characteristics to enhance our understanding of the complex process of biofilm formation in NTS and identify serovar-specific and serovar-common genes with possible roles in the sessile life style.

Sample: High Biofilm producer

SAMN07411536 • SRS2474597 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Typhimurium

Library:

Name: D15-052810

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 556,701 spots, 260.3M bases, 138.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR5985921	556,701	260.3M	138.1Mb	2017-08-28

ID:: 4437631

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