RNA-seq of Staurastrum punctulatum - SRA

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SRX1744554: RNA-seq of Staurastrum punctulatum
1 ILLUMINA (Illumina HiSeq 2000) run: 22.6M spots, 4.1G bases, 2.8Gb downloads

Design: polyA-selected and prepared using the Illumina TruSeq RNA Sample Preparation Kit, v2

Submitted by: Smithsonian Institution, NMNH

Study: Raw Illumina reads and transcriptome assemblies of Chlorella sorokiniana, Closteriopsis acicularis, Cosmarium turpinii, Pandorina charkowiensis, Scenedesmus acuminatus, Selenastrum capricornotum, Staurastrum punctulatum and Tetraedron minimum. In add

PRJNA312560 • SRP074367 • All experiments • All runs

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8 species of green algae were reared in monoculture and biculture to study the transcriptomic response of these species to the presence of a competitor. This study was used to test basic ecological hypotheses but the data has potential relevance for others interested in biofuels research.

Sample: Grown in 1L media bottles filled modified COMBO growth medium (enriched with 0.1 mM KCl and 30uM NH4Cl final concentrations); incubated in Wheaton (349000-A) roller racks at 20C under a 16:8 hour light:dark cycle at a light intensity of ca. 81 uEinstein

SAMN04957435 • SRS1423656 • All experiments • All runs

Organism: Staurastrum punctulatum

Library:

Name: DC70.R2T6

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 22.6M spots, 4.1G bases, 2.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR3478580	22,628,266	4.1G	2.8Gb	2017-06-04

ID:: 2502071

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