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SRX1707480: Whole genome shotgun sequencing of Salmonella enterica by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 729,959 spots, 359.1M bases, 217.4Mb downloads

External Id: EXT00180196
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services
PRJNA219491 • SRP033708 • All experiments • All runs
show Abstracthide Abstract
GenomeTrakr Project: Virginia - Division of Consolidated Laboratory Services (VA-DCLS)
Sample:
SAMN04605568 • SRS1398850 • All experiments • All runs
Organism: Salmonella enterica
Library:
Name: Salmonella enterica Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 729,959 spots, 359.1M bases, 217.4Mb
Run# of Spots# of BasesSizePublished
SRR3391898729,959359.1M217.4Mb2016-04-15

ID:
2444628

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