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SRX27031719: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.4M spots, 748.2M bases, 398Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN45502526 • SRS23495452 • All experiments • All runs
Organism: Clostridioides difficile
Library:
Name: BWH-CDIFF-0000-0098-0706
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.4M spots, 748.2M bases, 398Mb
Run# of Spots# of BasesSizePublished
SRR316690121,352,857748.2M398Mb2024-12-10

ID:
36503237

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