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SRX26854513: Metabarcode16S,phycoremediation,labratoryexperiment
1 ILLUMINA (Illumina MiSeq) run: 117,431 spots, 70.9M bases, 36.5Mb downloads

Design: 2 step PCR metabarcode 16S
Submitted by: Norsk institutt for vannforskning, NIVA
Study: phycoremediation metabarcode 16S 2023
show Abstracthide Abstract
AbstractAlgal-based wastewater remediation systems (phycoremediation) include phycosphere bacterial communities that influence algal growth, pollutant remediation, and downstream applications of biomass as fertilizers or bio-stimulants. This study investigated the bacterial community dynamics in a novel phycoremediation system using a co-culture of the green algae Stigeoclonium sp. and Oedogonium vaucheri. Bacterial abundance was estimated using flow cytometry (FCM), while community composition was assessed through 16S rRNA gene metabarcoding. Additionally, 28 bacterial strains were isolated from the bioremediation experiment, cultured, genetically characterized for identification and screened for production of the auxin phytohormone indole-3-acetic acid (IAA). Metabarcoding showed that the free-living bacterial community consisted of bacteria from both the wastewater effluent and the algal inocula, while the attached phycosphere community was dominated by bacteria from the algal inocula, indicating the stability of the algae-associated phycosphere. Taxa known to include plant growth-promoting bacteria (PGPB) were abundant, and several strains produced IAA. The bacterial community composition, combined with the potential production of phytohormone by isolated bacteria indicates symbiotic or commensal algae-microbe interactions within the phycosphere bacterial communities. Sterile filtration of wastewater effluent, including only the algal inoculum bacterial communities, reduced algal biomass production and increased bacterial abundance. This study highlights the critical role of microbial interactions in engineered ecosystems and provides insights for optimizing algal-based wastewater treatment technologies.
Sample:
SAMN45032416 • SRS23337545 • All experiments • All runs
Organism: metagenome
Library:
Name: 65
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 117,431 spots, 70.9M bases, 36.5Mb
Run# of Spots# of BasesSizePublished
SRR31486285117,43170.9M36.5Mb2024-11-25

ID:
36279946

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