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SRX26706741: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 2.1M spots, 1.1G bases, 618.2Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN44699167 • SRS23197891 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: BWH_1348_E_faem
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 2.1M spots, 1.1G bases, 618.2Mb
Run# of Spots# of BasesSizePublished
SRR313293272,065,6411.1G618.2Mb2024-11-13

ID:
36083143

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