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SRX26650512: Multiplexed amplicon sequencing of p falciparum control from mosquito midgut
1 ILLUMINA (Illumina MiSeq) run: 56,921 spots, 16.7M bases, 4.8Mb downloads

Design: Genomic DNA was extracted and purified. Multiplexed amplicon sequencing was performed using MAD4HatTeR V.4 (dx.doi.org/10.17504/protocols.io.14egn779mv5d/v4)
Submitted by: UCSF
Study: Plasmodium falciparum Raw sequence reads for controls and samples used to benchmark wetlab and bioinformatics methods
PRJNA1180199 • SRP543826 • All experiments • All runs
show Abstracthide Abstract
Sensitive and modular amplicon sequencing of Plasmodium falciparum diversity and resistance for research and public health benchmarking dataset.
Sample: parasites in infected midgut number 7 from membrane feeding experiment done with cohort patient 744 on 5-Dec-2018;
SAMN44521412 • SRS23144391 • All experiments • All runs
Organism: Plasmodium falciparum
Library:
Name: midguts4
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 56,921 spots, 16.7M bases, 4.8Mb
Run# of Spots# of BasesSizePublished
SRR3127157556,92116.7M4.8Mb2024-11-07

ID:
35997363

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