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ERX13268024: Whole genome sequencing of isolate SOMR_OS020M-A
1 ILLUMINA (NextSeq 550) run: 1.7M spots, 496.4M bases, 212.5Mb downloads

Submitted by: the seqafrica consortium
Study: Distribution of carbapenemase genes associated with global high-risk clones in Pseudomonas aeruginosa isolates in northern Tanzania
show Abstracthide Abstract
Identification and distribution of carbapenemase genes in P. aeruginosa vary geographically. Production and dissemination of carbapenemase genes is associated with P. aeruginosa high-risk sequence types and clones. Reporting of clinical impact and the occurrence of different carbapenemase genes and P. aeruginosa sequence types in Tanzania is limited, and necessitates their routine surveillance. The aim of this study was to provide an understanding of the carbapenemase genes and sequence types identified in P. aeruginosa isolates from chronic leg ulcer patients in two tertiary hospitals in northern Tanzania.
Sample: Pseudomonas aeruginosa ST2475 strain SOMR-OS020MA
SAMEA116293605 • ERS21337547 • All experiments • All runs
Library:
Instrument: NextSeq 550
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.7M spots, 496.4M bases, 212.5Mb
Run# of Spots# of BasesSizePublished
ERR138652681,705,739496.4M212.5Mb2024-10-21

ID:
35737322

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