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DRX388887: HiSeq X Ten paired end sequencing of SAMD00529748
1 ILLUMINA (HiSeq X Ten) run: 3.7M spots, 1.1G bases, 523.4Mb downloads

Submitted by: HARC
Study: Transcriptome relevance to canopy photosynthesis and transpiration of rice plants
show Abstracthide Abstract
Utilization of genetic resource is a key to successfully improve crop productivity while conserving water use. While photosynthesis and transpiration are regulated by both biotic and abiotic factors, plants with different genetic backgrounds may exhibit different environmental responses of photosynthesis and transpiration. It is known that field grown plants regulate gene expressions under dynamically changing environment. It is also known that different organs, such as leaf and root, have their unique characteristics in the gene expressions. This research aims to identify the gene species in leaves and roots, the expression of which is related to the variations of photosynthesis and transpiration of rice plants under two CO2-enrichment experiments: the free-air CO2 enrichment (FACE) experiment and the temperature gradient chamber (TGC) experiment.
Sample: leaf high CO2 rep8
SAMD00529748 • DRS403150 • All experiments • All runs
Library:
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RT-PCR
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward1251012  reverse

Runs: 1 run, 3.7M spots, 1.1G bases, 523.4Mb
Run# of Spots# of BasesSizePublished
DRR4031883,668,8431.1G523.4Mb2024-09-02

ID:
35014480

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