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SRX25809077: RNA-Seq of Marchantia polymorpha: gh3a Mock
1 ILLUMINA (Illumina NovaSeq X Plus) run: 27.9M spots, 8.4G bases, 2.6Gb downloads

Design: Novogene Illumina NovaSeq X Plus, totalRNA, poly-A
Submitted by: Centro Nacional de Biotecnologia
Study: Conjugation of dn-OPDA with amino acids inhibits its hormonal bioactivity in Marchantia polymorpha.
show Abstracthide Abstract
Jasmonates are important phytohormones activating plant tolerance to biotic and abiotic stress, as well as different development processes. These responses are mediated by a conserved signalling pathway activated by different hormones in different plants: dinor-12-oxo-phytodienoic acid (dn-OPDA) isomers in bryophytes and lycophytes, and JA-Ile in most vascular plants. The final responses depend, in many cases, on the accumulation of secondary metabolites. To identify novel compounds regulated by the dn-OPDA pathway in Marchantia, untargeted metabolomic analyses were carried out in response to dn-OPDA-regulated stress. A novel group of molecules were identified as dn-OPDA-amino acid conjugates (dn-OPDA-aas), and its accumulation after wounding and herbivory confirmed by targeted metabolic profiling in Marchantia and all species in which we previously found dn-iso-OPDA. Mutants in GRETCHEN-HAGEN 3A (MpGH3A) failed to accumulate dn-OPDA-aa conjugates, and showed a constitutive activation of the OPDA pathway and increased resistance to herbivory. Our results show that dn-iso-OPDA bioactivity is reduced by conjugation with amino acids. Therefore, an apparent dichotomous role of jasmonate conjugation in land plants is highlighted: jasmonic acid (JA) conjugation with isoleucine (Ile) produce the bioactive JA-Ile in tracheophytes, whereas conjugation of dn-iso-OPDA with different amino acids disactivate the hormone in bryophytes and lycophytes.
Sample: Wendy8
SAMN43309468 • SRS22440060 • All experiments • All runs
Library:
Name: Wendy8_MKRN240001570-1A_227JVNLT4_L6
Instrument: Illumina NovaSeq X Plus
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA_oligo_dT
Layout: PAIRED
Runs: 1 run, 27.9M spots, 8.4G bases, 2.6Gb
Run# of Spots# of BasesSizePublished
SRR3035082827,895,2768.4G2.6Gb2025-01-01

ID:
34842907

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