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SRX24883704: NGS sequencing of Blastocystis sp.: fecal samples
1 ILLUMINA (Illumina MiSeq) run: 4,416 spots, 1.9M bases, 951,193b downloads

Design: Amplicon libraries were purified and balanced on SequalPrep plates (Thermo, Waltham, MA, USA), pooled, supplemented with 20% PhiX control to balance the amplicon signal, and sequenced on a MiSeq instrument using Reagent Kit v2, 2x250 bp (Illumina).
Submitted by: Biology Centre CAS
Study: Blastocystis sp. Raw sequence reads
show Abstracthide Abstract
We aim to improve the epidemiological understanding of the intestinal protists Blastocystis sp. and D. fragilis by analyzing their prevalence and distribution of their subtypes/genotypes in different groups of NHPs and their caregivers in the zoological gardens across the Czech Republic. A major goal of this study is to explore the potential for zoonotic transmission, especially in environments that foster close contact, as is the case in zoos.
Sample: Z172_S54_L001_R1_001.fastq
SAMN41796387 • SRS21592379 • All experiments • All runs
Organism: Blastocystis
Library:
Name: LIB89
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 4,416 spots, 1.9M bases, 951,193b
Run# of Spots# of BasesSizePublished
SRR293692324,4161.9M951,193b2025-01-01

ID:
33218338

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