ddRADseq of Aedes albopictus - SRA

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SRX24760479: ddRADseq of Aedes albopictus
1 ILLUMINA (Illumina HiSeq 2000) run: 2M spots, 473.2M bases, 204.2Mb downloads

Design: Sample was digested with NlaIII and MluCI restriction enzymes. Files have been processed to retain reads with Phred scores > 20.

Submitted by: The University of Melbourne

Study: Global genomic databank for Aedes albopictus (ddRADseq)

PRJNA1118433 • SRP510945 • All experiments • All runs

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This databank contains sequences of 1101 Aedes albopictus, generated between 2016 and 2022. These include population samples collected from across a wide global range for use in incursion tracing (e.g. DOI: 10.1002/ps.5977) and understanding insecticide resistance evolution (e.g. DOI: 10.1101/2024.04.09.588653). These also include georeferenced samples collected at fine scales for use in dispersal analysis, from the Torres Strait Islands (DOI: 10.1111/mec.15792) and Guangzhou (DOI: 10.1371/journal.pntd.0006009).

Sample:

SAMN41610034 • SRS21480068 • All experiments • All runs

Organism: Aedes albopictus

Library:

Name: alb_JHR051

Instrument: Illumina HiSeq 2000

Strategy: RAD-Seq

Source: GENOMIC

Selection: Restriction Digest

Layout: PAIRED

Runs: 1 run, 2M spots, 473.2M bases, 204.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR29241793	1,988,195	473.2M	204.2Mb	2024-06-03

ID:: 33079821

SRA

Sequence Read Archive

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