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SRX23539982: Pcopri_ARA_3
1 ILLUMINA (Illumina MiSeq) run: 1M spots, 159.3M bases, 75.7Mb downloads

Design: Prevotella copri cells grown in a minimal media with 0.5% Arabinan at 37C in anaerobic conditions. Cells were harvested at mid log phase and mRNA was isolated before library construction and sequencing using a Illumina Miseq.
Submitted by: University of British Columbia
Study: Identification of Prevotella copri glycan utilization systems
show Abstracthide Abstract
Preveotella copri is predicted to deploy a range of glycan utilization systems in response to exposure to specific glycans. Here we exposed P. copri to to a single gylcan type, extract mRNA during the exponential phase of growth and sequence the mRNA to elucidate the transcription differences when compared to growth on a simple sugar, glucose.
Sample: Pcopri_ARA_3
SAMN39833551 • SRS20388177 • All experiments • All runs
Library:
Name: Pcopri_ARA_3
Instrument: Illumina MiSeq
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA_oligo_dT
Layout: PAIRED
Runs: 1 run, 1M spots, 159.3M bases, 75.7Mb
Run# of Spots# of BasesSizePublished
SRR278781391,001,435159.3M75.7Mb2024-02-06

ID:
31797380

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