Whole-genome sequence of Orientia tsutsugamushi str. TW-1 - SRA

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SRX23613520: Whole-genome sequence of Orientia tsutsugamushi str. TW-1
1 PACBIO_SMRT (Sequel) run: 1.9M spots, 5.1G bases, 1.2Gb downloads

Design: Genomic DNA was sheared using a Covaris g-TUBE and purified with AMPure PB beads for ~10 kbp libraries, and SMRTbell libraries were sequenced using a SMRT Cell 1M v3

Submitted by: National Taiwan University

Study: Complete genomes of Orientia tsutsugamushi strains TW-1 and TW-22 in Taiwan

PRJNA987430 • SRP489517 • All experiments • All runs

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This project contributes complete genomes of Orientia tsutsugamushi strains TW-1 and TW-22, which are the two most represented genotypes among clinical isolates in Taiwan. Orientia tsutsugamushi is the causative agent of scrub typhus, a chigger mite-borne rickettsial disease that is life-threatening if untreated.

Sample: Clinical isolate of Orientia tsutsugamushi str. TW-1

SAMN35980267 • SRS20453886 • All experiments • All runs

Organism: Orientia tsutsugamushi

Library:

Name: TW-1

Instrument: Sequel

Strategy: WGS

Source: GENOMIC

Selection: other

Layout: SINGLE

Runs: 1 run, 1.9M spots, 5.1G bases, 1.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR27956927	1,880,106	5.1G	1.2Gb	2024-04-02

ID:: 31887449

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