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SRX20625915: UCEs of Schiffornis turdina MZUSP_107510
1 ILLUMINA (Illumina HiSeq 2500) run: 1.7M spots, 514.2M bases, 160.7Mb downloads

Design: Sequence capture of ultraconserved elements
Submitted by: Museu de Zoologia da Universidade de Sao Paulo
Study: Integrative revision of species limits in the genus Schiffornis (Aves: Tityridae) reveals cryptic diversity in the Neotropics
show Abstracthide Abstract
Accurate species delimitation is essential for many biological subdisciplines.Nonetheless, taxonomic research has shown that current species diversity is underestimated,even in some of the best-studied groups of animals. Recent acoustic and genetic studies haveuncovered many morphologically cryptic bird species that were previously hidden bymorphology-based classifications. Yet, current estimates of bird species-level diversity in thetropics remain rooted in early morphological classifications, and so the need for integrativetaxonomic revision is urgent. Here, we take an integrative approach to examine species limitsin the genus Schiffornis, a widespread group of dull-plumaged, whistle-voiced suboscinepasserines of Neotropical humid-forest understory, currently considered to comprise sevenspecies. We measured geographic variation in song, morphology, and mitochondrial andgenome-wide nuclear markers to resolve the taxonomy of the genus. Our results suggest thatSchiffornis comprises 13 separately evolving population lineages, of which most qualify asspecies taxa under all species definitions. These include a cryptic new species, several speciessplits, and the resurrection of a taxon that was synonymized nearly a century ago in the S.turdina complex. We also found several hitherto unnoticed contact zones between diverginglineages and a leapfrog pattern of song variation in the S. turdina complex, and we highlightpotential avenues of further research of this genus
Sample: Schiffornis_UCEs
SAMN35661996 • SRS17925545 • All experiments • All runs
Library:
Name: P001_WD04
Instrument: Illumina HiSeq 2500
Strategy: Targeted-Capture
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 1.7M spots, 514.2M bases, 160.7Mb
Run# of Spots# of BasesSizePublished
SRR248618081,702,746514.2M160.7Mb2023-08-14

ID:
28054624

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