Whole genome sequencing of Rhizopus arrhizus - SRA

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SRX19255749: Whole genome sequencing of Rhizopus arrhizus
1 OXFORD_NANOPORE (MinION) run: 974,116 spots, 1.8G bases, 1.5Gb downloads

Design: Library preparation was carried out after isolation of genomic DNA and checking integrity over agarose gel and Qubit 2.0 fluorometer (260/280 > 1.8). Library preparation was done using SQK-LSK109 (Ligation Sequencing Kit).

Submitted by: CSIR-Institute of Genomics and Integrative Biology, New Delhi

Study: WGS-based studies of Covid-associated Rhizopus arrhizus infections in India

PRJNA930595 • SRP420581 • All experiments • All runs

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In the COVID-19 pandemic, specifically during the second wave in India (in 2022), many fungi were found to infect the human population on a large scale. Therefore, this study is WGS-based molecular and phylogenomics analysis of Covid-19 associated fungal infections.

Sample: Whole genome sequencing of Rhizopus arrhizus CAFI-CI-08

SAMN33014216 • SRS16658407 • All experiments • All runs

Organism: Rhizopus arrhizus

Library:

Name: LibraryID_008

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 974,116 spots, 1.8G bases, 1.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR23313084	974,116	1.8G	1.5Gb	2023-03-01

ID:: 26477048

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