U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX14755281: Molossus molossus Pacbio IsoSeq High quality transcripts: brain
1 PACBIO_SMRT (Sequel) run: 18,504 spots, 36.2M bases, 11.2Mb downloads

Design: PacBio Iso-seq libraries were prepared according to the Procedure & Checklist - Iso-Seq; BFX: default pipeline 1. ccs (v6.3.0), 2. lima (v2.5.0) 3. isoseq3-refine-cluster-polish (v3.4.0)
Submitted by: Bat1K
Study: Molossus molossus (Pallas's mastiff bat) genome sequencing, assembly and annotation
show Abstracthide Abstract
The Molossus molossus (Pallas's mastiff bat) is a bat species in the family of Molossidae and lives in Central and South America. This assembly has been produced as part of the Bat1K Project. DNA was collected from a male, wild caught in Gamboa, Panama by Dina Dechmann. The samples were prepared in the Long Read team of the DRESDEN concept Genome Center, and sequencing was conducted at DRESDEN concept Genome Center, and the MPI for Evolutionary Biology. Genome assembly, annotation and manual curation of chromosomes was conducted by the Bat1K group, and in particular by Martin Pippel of Gene Myers lab and David Jebb of Michael Hiller's lab at MPI-CBG. The primary haplotype contains the longest contigs of the DAmar assembly, phased with 10X linked reads, scaffolded with Bionano optical maps, and Phase Genomics HiC reads. Funding was from the Max Planck Society, and individual grants and awards to the persons listed above. The raw data and assembly are currently under a Bat1K publication embargo until removed from this description, following the Bat1K data use policy at the following URL: https://bat1k.ucd.ie/about/
Sample: Molossus molossus Pacbio IsoSeq High quality transcripts: brain
SAMN27363761 • SRS12516392 • All experiments • All runs
Library:
Name: DD_PB_ISOSEQ_mMOLMOL1
Instrument: Sequel
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 18,504 spots, 36.2M bases, 11.2Mb
Run# of Spots# of BasesSizePublished
SRR1865223118,50436.2M11.2Mb2022-04-08

ID:
21129079

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...