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SRX14310553: Pseudomonas sp strain PNPG3 draft genome sequence
1 ILLUMINA (Illumina HiSeq X) run: 8.4M spots, 2.5G bases, 764.6Mb downloads

Design: Denovo assembly was carried out using metaSPAdes assembler v 3.11.1, prformed with k-mer size 55 using de-Bruijn graph method
Submitted by: The University of Burdwan
Study: Pseudomonas sp. PNPG3 Genome sequencing
show Abstracthide Abstract
River Ganges is one of the major Rivers of India. Due to rapid increase in human population, industrial and other anthropocentric activities p-nitrophenol (PNP) might have been released into the River Ganges water from various sources. According to USEPA, PNP is a priority pollutant and is reported to be carcinogenic and mutagenic. Bacteria mediated bioremedition process offers a pollution free, eco-friendly, cost effective approach towards removal of PNP from Gangetic water sample. Pseudomonas sp. strain PNPG3 was isolated by enrichment culture technique and is capable of degrading PNP.
Sample: Microbe sample from Pseudomonas sp.
SAMN26116625 • SRS12126861 • All experiments • All runs
Library:
Name: PNPG3.R1
Instrument: Illumina HiSeq X
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 8.4M spots, 2.5G bases, 764.6Mb
Run# of Spots# of BasesSizePublished
SRR181631348,398,6372.5G764.6Mb2022-03-31

ID:
20283446

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